Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798182.1_cds_XP_016458990.1_5216
CDS Infomation

[gene=LOC107782602] [db_xref=GeneID:107782602] [protein=RING-H2 finger protein ATL52-like] [protein_id=XP_016458990.1] [location=complement(21567..22607)] [gbkey=CDS]
Sequence

ATGGTGCCTGTAAATAATTCAAGAGCATATATGAGCACAAGGGATTGTTCTCAAGGATTT
TGCAGTTCATACTGCCCACAGTGGTGTTATATAATCTTCCCACCTCCACCTCCATTTGAT
GACTTCCCTGATGATGATGATGATTCTGGTCCAAATTTCTCTCCTCTAATTATCGGCATC
ATCGGAATTCTTGCCAGTGCTTTCCTTCTAGTTAGCTACTATGTCATAATGTCAAAGTGC
TGTGGGCACAGAAATGCTTTTAGAAGAAGGGATGAGGATCATCTTAATGATTCAGAATTG
GAAGAGAATCAAGACCCTTCAAATCTTGAGGCATGGCATGTGAATACGACAGGTTTAGAC
GAATCCCTGATCAAGTCGATTACAGTGTTGAAGTACAAGAAAGGAGGTGGATTAGCAGAG
GGAACGGATTGTTCTGTATGTCTGAGTGAATTTCAAGAAGATGAAAGCGTTAAACTTTTA
CTAAAATGCAGCCATGCTTTTCATGTTACGTGCATTGATACATGGCTTAAATCTCACTCC
AATTGCCCTTTATGTCGTGCTACTATAGTGTTTGTAAATGCTTCACCACCTCCTTTAGTT
ATTGAAGTTATCGAAGCTCCACTGATTAACGAAAGAACCTTCCGAATCCAACCTCAAAAC
GACATAGAAATGGGGGTCAGAGAGGAGGATGTAGAAGTTGCAGAAAGTAGAGTTCTCAAG
AGCCTAATAACAGAAAATATGAATGCACAAATTAGAAGACCAGTATCAATGGATCAAGTG
TCGCGAGGTGTTTTATCTATAGCTGATATACTAAAGTTTGATCACGACGAAGATTGTCAA
ATGGGAGATTGCCGGTTTCATGAGAGAGATGTTGGAACATCAAAACAAGAAGTAGGGGAA
GAAGTAAGCAGTAGTGAGAATAGAAACAGCACACTACCACATTGTGTGTCAAATCCCATG
GCTATGAAGAGATCTTTTTCCAGTGGGAGATTCATGTTCCCTAAACGTGCAACAGGACAG
AACATGATCATTCCTTTGTGA

Peptide Sequence

PEP ID

XP_016458990.1
PEP Infomation

PREDICTED: RING-H2 finger protein ATL52-like [Nicotiana tabacum]
Sequence

MVPVNNSRAYMSTRDCSQGFCSSYCPQWCYIIFPPPPPFDDFPDDDDDSGPNFSPLIIGI
IGILASAFLLVSYYVIMSKCCGHRNAFRRRDEDHLNDSELEENQDPSNLEAWHVNTTGLD
ESLIKSITVLKYKKGGGLAEGTDCSVCLSEFQEDESVKLLLKCSHAFHVTCIDTWLKSHS
NCPLCRATIVFVNASPPPLVIEVIEAPLINERTFRIQPQNDIEMGVREEDVEVAESRVLK
SLITENMNAQIRRPVSMDQVSRGVLSIADILKFDHDEDCQMGDCRFHERDVGTSKQEVGE
EVSSSENRNSTLPHCVSNPMAMKRSFSSGRFMFPKRATGQNMIIPL

Transcript Sequence

Gene sequence data has not been registered.